90 FISH SNPS and INDELS Purcell 2017

Downloadable File
Organism: 
Seriola dorsalis (Yellowtail Amberjack)
Program, Pipeline Name or Method Name: 
bwa mapping, picard, gatk,vcftools,tabix
Program, Pipeline or Method version: 
bwa 0.7.15, picard 2.9, gatk3.6, vcftools 0.1.14,tabix 0.2.6
Source Name: 
ISU Genome Informatics Facility
Time Executed: 
06/08/2017
Materials & Methods (Description and/or Program Settings): 
This is the two column correspondence for the metadata in SRA. 7492 LP-5615-F 7493 LP-6188-F 7494 LP-6186-F 7495 LP-6184-F 7496 LP-5568-F 7497 LP-5031-F 7498 LP-5604-F 7499 LP-5566-M 7500 LP-5054-M 7501 LP-6126-M 7502 LP-6141-M 7503 LP-6116-M 7504 LP-5042-M 7505 LP-5624-M 7506 LP-5580-M 7507 CI798-31-F 7508 CI798-18-F 7509 CI798-13-F 7510 CI798-38-F 7511 CI798-06-F 7512 CI798-12-F 7513 CI798-09-F 7514 CI798-33-F 7515 CI798-34-M 7516 CI798-26B-M 7517 CI798-19-M 7518 CI798-29B-M 7519 CI798-48B-M 7520 CI798-28-M 7521 CI798-41-M 7522 SD682-15-F 7523 SD682-02-F 7524 SD682-08-F 7525 SD682-70-F 7526 SD682-04-F 7527 SD682-14-F 7528 SD624-90-F 7529 SD624-93-F 7530 SD682-59-M 7531 SD621-37-M 7532 SD682-62-M 7533 SD682-91-M 7534 SD621-36-M 7535 SD682-58-M 7536 SD681-78-M 7537 LP-6181-F 7538 LP-5606-F 7539 LP-6179-F 7540 LP-5061-F 7541 LP-6194-F 7542 LP-5571-F 7543 LP-6138-F 7544 LP-5044-M 7545 LP-6176-M 7546 LP-6187-M 7547 LP-5572-M 7548 LP-5620-M 7549 LP-6133-M 7550 LP-5045-M 7551 LP-6185-M 7552 CI798-07-F 7553 CI798-23-F 7554 CI798-24-F 7555 CI798-15-F 7556 CI798-08-F 7557 CI798-11-F 7558 CI798-17-F 7559 CI798-27-M 7560 CI798-05-M 7561 CI798-39-M 7562 CI798-47-M 7563 CI798-10-M 7564 CI798-35-M 7565 CI798-30-M 7566 CI798-40-M 7567 SD681-76-F 7568 SD682-03-F 7569 SD705-10-F 7570 SD705-07-F 7571 SD682-89-F 7572 SD682-88-F 7573 SD705-04-F 7574 SD682-16-M 7575 SD681-74-M 7576 SD705-09-M 7577 SD682-98-M 7578 SD682-63-M 7579 SD682-87-M 7580 SD681-77-M 7581 SD705-05-M